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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015836154.1_cds_XP_016506209.1_19458
CDS Infomation

[gene=LOC107824001] [db_xref=GeneID:107824001] [protein=putative cyclic nucleotide-gated ion channel 15] [protein_id=XP_016506209.1] [location=complement(join(55534..55834,56311..56705,57123..57359,57467..57578,57651..57943,58169..58381,58631..59177,59578..59606))] [gbkey=CDS]
Sequence

ATGTCTTCTACTAAACAAAAATCTGTCAGATTTCCGAATGACCATGACATTGCAAAATCT
GGATCATACAAGCCGGCAAAATTCCTTAAATCTTTCTCTATGAACAATGACGAACAAGCG
TCTGATTCAAAGTCCGAGAAAGCAGAAATAGAGCCAAAAATGAAGATGTTCCGAAAGAAA
AAGCTTTCAAGAGTATTTTCAGAGGACTATGAGGGTGTTCAAAGGAAGATATTAGATCCT
CGAGGACGTCCCATAAACATATGGAACAAGTGTTTCTTAATTGCTTGTCTTACATCTCTA
TTTGTTGATCCACTCTTCTTCTATTTACCAAGTGTTAACGACGAAATCTGCATGGATGCA
AGTTATCCTATGGAGATAGTCCTTACAATCGTTCGATCAGTAATAGATGCATTTTATTTG
GTACAGATTTTAGTTCAGTTTCGAACAGCTTATGTTGCACCTTCCTCTCGCGTTTTTGGT
AGAGGAGAGCTAGTCATTGATTCTTCAAAGATCGCTTCAAGGTATCTTCGGAAGGATTTT
TGGCTTGATCTCTTGGCTACTCTTCCTCTTCCTCAGGTTTTGATTTGGGCTGCAATCCCA
TCTTTGAGAGGTTCGAATAGGATTGGTGCAAAACACGCCTTGCGCTTTACTATCATTTCT
CAGTTTCTGTTGAGGTTATGCCTGATTTTTCCACTTTCATCTCACATTATCAAGACTAAT
GGTGTAATGGTGGAAGCTGCATGGGCTGGAGCGGTTTATAACCTTGTGCTCTTCATGCTC
GCAAGTCATGTTATGGGTTCTTGCTGGTACCTTTTTGCTGTAGAACGACAAGAACAGTGT
TGGAAAAAGGTTTGTGATCAACAGCAACCGGATTGCCAGTATTGGTATTTTGACTGTCAT
TGGAAAGATTTTACTAGTAGAATCGCCTGGTATGAACGGAGCAATATATCTACATTATGC
GGTCCTAGCAGCGACTTCTTCCAATTCGGAATCTTTAATGATGCACTGACTTTTAGAGTT
ACACAATCATCATTCTTGAACAAATATGCTTACTGTTTTTGGTGGGGTTTAAGGAACCTA
AGCTCTCTTGGGCAGAATCTTGTGACTACTACTGACATTAATGAAATTAATTTTGCTGTT
GTTCTTGCAATTCTGGGATTATTGCTCTTTGCTTTACTTATTGGGAATATGCAGACTTTT
CTTCAATCAACTACTATGAGACTTGAAGAATGGAGGATCAAAAGGACAGATACAGAAGAA
TGGATGCATCATCGCCAACTCCCCCACGATCTTAAGGAAAGGGTGCGCAAATATGACTTG
TATAGGTGGGTGACAACGCGAGGCGTTGATGAAGAAGCCATTGTCAAAAGCCTTCCCGTG
GATCTCAGAAGGGACATCAAGCGTCATCTTTGTCTTGATCTAGTTCGTCGAGTTCCTCTA
TTTGATCAAATGGATGAGTGTATCTTGGATGCAATATGCGAAAGGTTGAAACCGCTTCTA
TATACATCAGGAACTTGCCTTGTTCGCGAAGCTGATCCTGTGAACGAAATGCACTTCATT
ATAAGAGGCCATTTGGATTCTTACACTACTGATGGAGGGAGAACAGGTTTTTTCAATTCA
TGTCAACTAGGTCCGTGCGATTTCTGTGGTGAAGAACTACTGACATGGGCGTTACACCCT
CGTCCGAGCATCATCCTCCCGTCCTCTACACGTACAGTGACAACGATCACTGAAGTAGAA
GTATTTGCACTCACTGCAGAGGATGTAAAATTTGTGGCATCACAGTTCCGGAAGCTGCAT
AGCAAGCAACTCAGGCAGACGTTCAGGTTTTACTCGAACCAATGGAGGACTTGGGCTGCA
TGTTTCATACAAGCAGCGTGGTTTCGCTACAAGAGGAGGAAAGAGGCTGCTCTACTTAAA
GCTAAGCAGAGCCCCGCGGCTGCTCCTACTGAACTACGCGATGAAAGAAGAAGTGTATCC
TTGGGACAAAAGGCTTCAGAATTTGCTGTATATGCTGCAACATTGGCAGCAAGCAAAAGA
AAAGGCGGAAGCATGAGGGGAGAACTAGAAATCATTAGTTCATTACAAAAACCAGTAGAA
CCTGATTTTTCAGTTGAGGATAGATGA

Peptide Sequence

PEP ID

XP_016506209.1
PEP Infomation

PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Nicotiana tabacum]
Sequence

MSSTKQKSVRFPNDHDIAKSGSYKPAKFLKSFSMNNDEQASDSKSEKAEIEPKMKMFRKK
KLSRVFSEDYEGVQRKILDPRGRPINIWNKCFLIACLTSLFVDPLFFYLPSVNDEICMDA
SYPMEIVLTIVRSVIDAFYLVQILVQFRTAYVAPSSRVFGRGELVIDSSKIASRYLRKDF
WLDLLATLPLPQVLIWAAIPSLRGSNRIGAKHALRFTIISQFLLRLCLIFPLSSHIIKTN
GVMVEAAWAGAVYNLVLFMLASHVMGSCWYLFAVERQEQCWKKVCDQQQPDCQYWYFDCH
WKDFTSRIAWYERSNISTLCGPSSDFFQFGIFNDALTFRVTQSSFLNKYAYCFWWGLRNL
SSLGQNLVTTTDINEINFAVVLAILGLLLFALLIGNMQTFLQSTTMRLEEWRIKRTDTEE
WMHHRQLPHDLKERVRKYDLYRWVTTRGVDEEAIVKSLPVDLRRDIKRHLCLDLVRRVPL
FDQMDECILDAICERLKPLLYTSGTCLVREADPVNEMHFIIRGHLDSYTTDGGRTGFFNS
CQLGPCDFCGEELLTWALHPRPSIILPSSTRTVTTITEVEVFALTAEDVKFVASQFRKLH
SKQLRQTFRFYSNQWRTWAACFIQAAWFRYKRRKEAALLKAKQSPAAAPTELRDERRSVS
LGQKASEFAVYAATLAASKRKGGSMRGELEIISSLQKPVEPDFSVEDR

Transcript Sequence

Gene sequence data has not been registered.